fMRI
Human Brain Compresses Working Memories into Low-Res ‘Summaries’
Posted on by Lawrence Tabak, D.D.S., Ph.D.

You have probably done it already a few times today. Paused to remember a password, a shopping list, a phone number, or maybe the score to last night’s ballgame. The ability to store and recall needed information, called working memory, is essential for most of the human brain’s higher cognitive processes.
Researchers are still just beginning to piece together how working memory functions. But recently, NIH-funded researchers added an intriguing new piece to this neurobiological puzzle: how visual working memories are “formatted” and stored in the brain.
The findings, published in the journal Neuron, show that the visual cortex—the brain’s primary region for receiving, integrating, and processing visual information from the eye’s retina—acts more like a blackboard than a camera. That is, the visual cortex doesn’t photograph all the complex details of a visual image, such as the color of paper on which your password is written or the precise series of lines that make up the letters. Instead, it recodes visual information into something more like simple chalkboard sketches.
The discovery suggests that those pared down, low-res representations serve as a kind of abstract summary, capturing the relevant information while discarding features that aren’t relevant to the task at hand. It also shows that different visual inputs, such as spatial orientation and motion, may be stored in virtually identical, shared memory formats.
The new study, from Clayton Curtis and Yuna Kwak, New York University, New York, builds upon a known fundamental aspect of working memory. Many years ago, it was determined that the human brain tends to recode visual information. For instance, if passed a 10-digit phone number on a card, the visual information gets recoded and stored in the brain as the sounds of the numbers being read aloud.
Curtis and Kwak wanted to learn more about how the brain formats representations of working memory in patterns of brain activity. To find out, they measured brain activity with functional magnetic resonance imaging (fMRI) while participants used their visual working memory.
In each test, study participants were asked to remember a visual stimulus presented to them for 12 seconds and then make a memory-based judgment on what they’d just seen. In some trials, as shown in the image above, participants were shown a tilted grating, a series of black and white lines oriented at a particular angle. In others, they observed a cloud of dots, all moving in a direction to represent those same angles. After a short break, participants were asked to recall and precisely indicate the angle of the grating’s tilt or the dot cloud’s motion as accurately as possible.
It turned out that either visual stimulus—the grating or moving dots—resulted in the same patterns of neural activity in the visual cortex and parietal cortex. The parietal cortex is a part of the brain used in memory processing and storage.
These two distinct visual memories carrying the same relevant information seemed to have been recoded into a shared abstract memory format. As a result, the pattern of brain activity trained to recall motion direction was indistinguishable from that trained to recall the grating orientation.
This result indicated that only the task-relevant features of the visual stimuli had been extracted and recoded into a shared memory format. But Curtis and Kwak wondered whether there might be more to this finding.
To take a closer look, they used a sophisticated model that allowed them to project the three-dimensional patterns of brain activity into a more-informative, two-dimensional representation of visual space. And, indeed, their analysis of the data revealed a line-like pattern, similar to a chalkboard sketch that’s oriented at the relevant angles.
The findings suggest that participants weren’t actually remembering the grating or a complex cloud of moving dots at all. Instead, they’d compressed the images into a line representing the angle that they’d been asked to remember.
Many questions remain about how remembering a simple angle, a relatively straightforward memory formation, will translate to the more-complex sets of information stored in our working memory. On a technical level, though, the findings show that working memory can now be accessed and captured in ways that hadn’t been possible before. This will help to delineate the commonalities in working memory formation and the possible differences, whether it’s remembering a password, a shopping list, or the score of your team’s big victory last night.
Reference:
[1] Unveiling the abstract format of mnemonic representations. Kwak Y, Curtis CE. Neuron. 2022, April 7; 110(1-7).
Links:
Working Memory (National Institute of Mental Health/NIH)
The Curtis Lab (New York University, New York)
NIH Support: National Eye Institute
Tapping Into The Brain’s Primary Motor Cortex
Posted on by Dr. Francis Collins
If you’re like me, you might catch yourself during the day in front of a computer screen mindlessly tapping your fingers. (I always check first to be sure my mute button is on!) But all that tapping isn’t as mindless as you might think.
While a research participant performs a simple motor task, tapping her fingers together, this video shows blood flow within the folds of her brain’s primary motor cortex (gray and white), which controls voluntary movement. Areas of high brain activity (yellow and red) emerge in the omega-shaped “hand-knob” region, the part of the brain controlling hand movement (right of center) and then further back within the primary somatic cortex (which borders the motor cortex toward the back of the head).
About 38 seconds in, the right half of the video screen illustrates that the finger tapping activates both superficial and deep layers of the primary motor cortex. In contrast, the sensation of a hand being brushed (a sensory task) mostly activates superficial layers, where the primary sensory cortex is located. This fits with what we know about the superficial and deep layers of the hand-knob region, since they are responsible for receiving sensory input and generating motor output to control finger movements, respectively [1].
The video showcases a new technology called zoomed 7T perfusion functional MRI (fMRI). It was an entry in the recent Show Us Your BRAINs! Photo and Video Contest, supported by NIH’s Brain Research Through Advancing Innovative Neurotechnologies® (BRAIN) Initiative.
The technology is under development by an NIH-funded team led by Danny J.J. Wang, University of Southern California Mark and Mary Stevens Neuroimaging and Informatics Institute, Los Angeles. Zoomed 7T perfusion fMRI was developed by Xingfeng Shao and brought to life by the group’s medical animator Jim Stanis.
Measuring brain activity using fMRI to track perfusion is not new. The brain needs a lot of oxygen, carried to it by arteries running throughout the head, to carry out its many complex functions. Given the importance of oxygen to the brain, you can think of perfusion levels, measured by fMRI, as a stand-in measure for neural activity.
There are two things that are new about zoomed 7T perfusion fMRI. For one, it uses the first ultrahigh magnetic field imaging scanner approved by the Food and Drug Administration. The technology also has high sensitivity for detecting blood flow changes in tiny arteries and capillaries throughout the many layers of the cortex [2].
Compared to previous MRI methods with weaker magnets, the new technique can measure blood flow on a fine-grained scale, enabling scientists to remove unwanted signals (“noise”) such as those from surface-level arteries and veins. Getting an accurate read-out of activity from region to region across cortical layers can help scientists understand human brain function in greater detail in health and disease.
Having shown that the technology works as expected during relatively mundane hand movements, Wang and his team are now developing the approach for fine-grained 3D mapping of brain activity throughout the many layers of the brain. This type of analysis, known as mesoscale mapping, is key to understanding dynamic activities of neural circuits that connect brain cells across cortical layers and among brain regions.
Decoding circuits, and ultimately rewiring them, is a major goal of NIH’s BRAIN Initiative. Zoomed 7T perfusion fMRI gives us a window into 4D biology, which is the ability to watch 3D objects over time scales in which life happens, whether it’s playing an elaborate drum roll or just tapping your fingers.
References:
[1] Neuroanatomical localization of the ‘precentral knob’ with computed tomography imaging. Park MC, Goldman MA, Park MJ, Friehs GM. Stereotact Funct Neurosurg. 2007;85(4):158-61.
[2]. Laminar perfusion imaging with zoomed arterial spin labeling at 7 Tesla. Shao X, Guo F, Shou Q, Wang K, Jann K, Yan L, Toga AW, Zhang P, Wang D.J.J bioRxiv 2021.04.13.439689.
Links:
Brain Basics: Know Your Brain (National Institute of Neurological Disorders and Stroke)
Laboratory of Functional MRI Technology (University of Southern California Mark and Mary Stevens Neuroimaging and Informatics Institute)
The Brain Research Through Advancing Innovative Neurotechnologies® (BRAIN) Initiative (NIH)
Show Us Your BRAINs! Photo and Video Contest (BRAIN Initiative)
NIH Support: National Institute of Neurological Disorders and Stroke; National Institute of Biomedical Imaging and Bioengineering; Office of the Director
Discovering the Brain’s Nightly “Rinse Cycle”
Posted on by Dr. Francis Collins
Getting plenty of deep, restful sleep is essential for our physical and mental health. Now comes word of yet another way that sleep is good for us: it triggers rhythmic waves of blood and cerebrospinal fluid (CSF) that appear to function much like a washing machine’s rinse cycle, which may help to clear the brain of toxic waste on a regular basis.
The video above uses functional magnetic resonance imaging (fMRI) to take you inside a person’s brain to see this newly discovered rinse cycle in action. First, you see a wave of blood flow (red, yellow) that’s closely tied to an underlying slow-wave of electrical activity (not visible). As the blood recedes, CSF (blue) increases and then drops back again. Then, the cycle—lasting about 20 seconds—starts over again.
The findings, published recently in the journal Science, are the first to suggest that the brain’s well-known ebb and flow of blood and electrical activity during sleep may also trigger cleansing waves of blood and CSF. While the experiments were conducted in healthy adults, further study of this phenomenon may help explain why poor sleep or loss of sleep has previously been associated with the spread of toxic proteins and worsening memory loss in people with Alzheimer’s disease.
In the new study, Laura Lewis, Boston University, MA, and her colleagues at the Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Boston. recorded the electrical activity and took fMRI images of the brains of 13 young, healthy adults as they slept. The NIH-funded team also built a computer model to learn more about the fluid dynamics of what goes on in the brain during sleep. And, as it turns out, their sophisticated model predicted exactly what they observed in the brains of living humans: slow waves of electrical activity followed by alternating waves of blood and CSF.
Lewis says her team is now working to come up with even better ways to capture CSF flow in the brain during sleep. Currently, people who volunteer for such experiments have to be able to fall asleep while wearing an electroencephalogram (EEG) cap inside of a noisy MRI machine—no easy feat. The researchers are also recruiting older adults to begin exploring how age-related changes in brain activity during sleep may affect the associated fluid dynamics.
Reference:
[1] Coupled electrophysiological, hemodynamic, and cerebrospinal fluid oscillations in human sleep. Fultz NE, Bonmassar G, Setsompop K, Stickgold RA, Rosen BR, Polimeni JR, Lewis LD. Science. 2019 Nov 1;366(6465):628-631.
Links:
Sleep and Memory (National Institute of Mental Health/NIH)
Sleep Deprivation and Deficiency (National Heart, Lung, and Blood Institute/NIH)
Alzheimer’s Disease and Related Dementias (National Institute on Aging/NIH)
NIH Support: National Institute of Mental Health; National Institute of Biomedical Imaging and Bioengineering; National Institute of Neurological Disorders and Stroke
Study Suggests Light Exercise Helps Memory
Posted on by Dr. Francis Collins

Credit: iStock/Wavebreakmedia
How much exercise does it take to boost your memory skills? Possibly a lot less than you’d think, according to the results of a new study that examined the impact of light exercise on memory.
In their study of 36 healthy young adults, researchers found surprisingly immediate improvements in memory after just 10 minutes of low-intensity pedaling on a stationary bike [1]. Further testing by the international research team reported that the quick, light workout—which they liken in intensity to a short yoga or tai chi session—was associated with heightened activity in the brain’s hippocampus. That’s noteworthy because the hippocampus is known for its involvement in remembering facts and events.
Autism Spectrum Disorder: Progress Toward Earlier Diagnosis
Posted on by Dr. Francis Collins

Stockbyte
Research shows that the roots of autism spectrum disorder (ASD) generally start early—most likely in the womb. That’s one more reason, on top of a large number of epidemiological studies, why current claims about the role of vaccines in causing autism can’t be right. But how early is ASD detectable? It’s a critical question, since early intervention has been shown to help limit the effects of autism. The problem is there’s currently no reliable way to detect ASD until around 18–24 months, when the social deficits and repetitive behaviors associated with the condition begin to appear.
Several months ago, an NIH-funded team offered promising evidence that it may be possible to detect ASD in high-risk 1-year-olds by shifting attention from how kids act to how their brains have grown [1]. Now, new evidence from that same team suggests that neurological signs of ASD might be detectable even earlier.
Big Data and Imaging Analysis Yields High-Res Brain Map
Posted on by Dr. Francis Collins

Caption: Map of 180 areas in the left and right hemispheres of the cerebral cortex.
Credit: Matthew F. Glasser, David C. Van Essen, Washington University Medical School, Saint Louis, Missouri
Neuroscientists have been working for a long time to figure out how the human brain works, and that has led many through the years to attempt to map its various regions and create a detailed atlas of their complex geography and functions. While great progress has been made in recent years, existing brain maps have remained relatively blurry and incomplete, reflecting only limited aspects of brain structure or function and typically in just a few people.
In a study reported recently in the journal Nature, an NIH-funded team of researchers has begun to bring this map of the human brain into much sharper focus [1]. By combining multiple types of cutting-edge brain imaging data from more than 200 healthy young men and women, the researchers were able to subdivide the cerebral cortex, the brain’s outer layer, into 180 specific areas in each hemisphere. Remarkably, almost 100 of those areas had never before been described. This new high-resolution brain map will advance fundamental understanding of the human brain and will help to bring greater precision to the diagnosis and treatment of many brain disorders.
Explaining the Traveler’s First-Night Sleep Problem
Posted on by Dr. Francis Collins

Stock photo/Wavebreakmedia Ltd
This past weekend, I attended a scientific meeting in New York. As often seems to happen to me in a hotel, I tossed and turned and woke up feeling not very rested. The second night I did a bit better. Why is this? Using advanced neuroimaging techniques to study volunteers in a sleep lab, NIH-funded researchers have come up with a biological explanation for this phenomenon, known as “the first-night effect.”
As it turns out, the first night when a person goes to sleep in a new place, a portion of the left hemisphere of his or her brain remains unusually active, apparently to stay alert for any signs of danger. The new findings not only provide important insights into the function of the human brain, they also suggest methods to prevent the first-night effect and thereby help travelers like me in our ongoing quest to get a good night’s sleep.
Neuroscience: The Power of Curiosity to Inspire Learning
Posted on by Dr. Francis Collins
When our curiosity is piqued, learning can be a snap and recalling the new information comes effortlessly. But when it comes to things we don’t care about—the recipe to that “delicious” holiday fruitcake or, if we’re not really into football, the results of this year’s San Diego County Credit Union Poinsettia Bowl—the new information rarely sticks.
To probe why this might be so, neuroscientists Charan Ranganath and Matthias Gruber, and psychologist Bernard Gelman, all at the University of California at Davis, devised a multi-step experiment to explore which regions of the brain are activated when we are curious, and how curiosity enhances our ability to learn and remember.